Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS06605 | Not Available | Positive | 1390055 - 1390339 | 10693.9 |
| murr/rpir family transcriptional regulator | BST98_RS06610 | Not Available | Positive | 1390526 - 1391383 | 32503.8 |
| peptidase t | BST98_RS06615 | Not Available | Positive | 1391440 - 1392681 | 45655.1 |
| alanine/glycine:cation symporter family protein | BST98_RS06620 | Not Available | Negative | 1392777 - 1394267 | 53408.0 |
| hypothetical protein | BST98_RS22305 | Not Available | Negative | 1395059 - 1395235 | 6658.76 |
| ribonuclease t2 family protein | BST98_RS06625 | Not Available | Negative | 1395491 - 1396468 | 36329.2 |
| hypothetical protein | BST98_RS06630 | Not Available | Positive | 1396994 - 1397305 | 11670.1 |
| abc transporter atp-binding protein | BST98_RS06635 | Not Available | Positive | 1397704 - 1398564 | 32071.2 |
| abc transporter | BST98_RS06640 | Not Available | Positive | 1398568 - 1399407 | 31228.3 |
| hypothetical protein | BST98_RS06645 | Not Available | Negative | 1399467 - 1399670 | 7665.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

