Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter tsga | BST98_RS06555 | Not Available | Negative | 1380425 - 1381612 | 43711.7 |
| uroporphyrinogen-iii c-methyltransferase | BST98_RS06560 | Not Available | Positive | 1382025 - 1382846 | 30139.8 |
| anaerobic sulfite reductase subunit asra | BST98_RS06565 | Not Available | Positive | 1382851 - 1383897 | 40243.8 |
| anaerobic sulfite reductase subunit asrb | BST98_RS06570 | Not Available | Positive | 1383906 - 1384739 | 31301.7 |
| sulfite reductase subunit c | BST98_RS06575 | Not Available | Positive | 1384750 - 1385760 | 37465.7 |
| hypothetical protein | BST98_RS06580 | Not Available | Positive | 1385865 - 1386332 | 17688.1 |
| sh3 domain-containing protein | BST98_RS06585 | Not Available | Positive | 1386529 - 1387158 | 22759.1 |
| c4-dicarboxylate transporter dcuc | BST98_RS06590 | Not Available | Positive | 1387465 - 1388820 | 47829.5 |
| hypothetical protein | BST98_RS06595 | Not Available | Negative | 1388968 - 1389333 | 13446.0 |
| hypothetical protein | BST98_RS06600 | Not Available | Negative | 1389438 - 1389830 | 14504.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

