Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | BST98_RS06505 | Not Available | Positive | 1364561 - 1364971 | 16296.7 |
| alanine/glycine:cation symporter family protein | BST98_RS06510 | Not Available | Negative | 1365047 - 1366453 | 49740.7 |
| glycoside hydrolase family 18 protein | BST98_RS06515 | Not Available | Negative | 1366959 - 1368269 | 48858.0 |
| dna-binding response regulator | BST98_RS06520 | Not Available | Positive | 1368722 - 1369426 | 26691.1 |
| efflux rnd transporter permease subunit | BST98_RS06525 | Not Available | Negative | 1369418 - 1372513 | 112990.0 |
| efflux rnd transporter periplasmic adaptor subunit | BST98_RS06530 | Not Available | Negative | 1372506 - 1373597 | 40446.7 |
| tetr/acrr family transcriptional regulator | BST98_RS06535 | Not Available | Positive | 1373762 - 1374391 | 23839.9 |
| hypothetical protein | BST98_RS06540 | Not Available | Positive | 1374524 - 1374922 | 13690.4 |
| hypothetical protein | BST98_RS06545 | Not Available | Positive | 1375123 - 1375584 | 17465.0 |
| ssle/acfd family lipoprotein zinc metalloprotease | BST98_RS06550 | Not Available | Positive | 1375812 - 1380341 | 168596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

