Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-xanthine permease family protein | BST98_RS00610 | Not Available | Negative | 123627 - 125033 | 49214.3 |
| atp-dependent dna helicase recg | BST98_RS00615 | Not Available | Negative | 125337 - 127418 | 77289.6 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | BST98_RS00620 | Not Available | Negative | 127434 - 128144 | 26269.6 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | BST98_RS00625 | Not Available | Negative | 128243 - 130348 | 79109.7 |
| dna-directed rna polymerase subunit omega | BST98_RS00630 | Not Available | Negative | 130367 - 130642 | 10104.0 |
| guanylate kinase | BST98_RS00635 | Not Available | Negative | 130695 - 131321 | 23402.8 |
| yicc/yloc family endoribonuclease | BST98_RS00640 | Not Available | Negative | 131533 - 132396 | 32710.2 |
| ribonuclease ph | BST98_RS00645 | Not Available | Positive | 132634 - 133350 | 25793.2 |
| orotate phosphoribosyltransferase | BST98_RS00650 | Not Available | Positive | 133482 - 134123 | 23276.8 |
| nucleoid occlusion factor slma | BST98_RS00655 | Not Available | Negative | 134211 - 134801 | 22729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

