Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | BST98_RS06450 | Not Available | Negative | 1351540 - 1352583 | 40188.9 |
| putative transporter | BST98_RS06455 | Not Available | Negative | 1352756 - 1354414 | 58772.2 |
| nrdjb | BST98_RS06460 | Not Available | Negative | 1354879 - 1355565 | 25772.8 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | BST98_RS06465 | Not Available | Negative | 1355594 - 1357744 | 80500.5 |
| porin | BST98_RS06470 | Not Available | Negative | 1358182 - 1359192 | 37358.4 |
| porin | BST98_RS06480 | Not Available | Negative | 1359506 - 1360531 | 37113.5 |
| thiol:disulfide interchange protein dsba/dsbl | BST98_RS06485 | Not Available | Negative | 1360859 - 1361485 | 23379.1 |
| molecular chaperone | BST98_RS06490 | Not Available | Positive | 1361739 - 1363091 | 50079.7 |
| high-potential iron-sulfur protein | BST98_RS06495 | Not Available | Negative | 1363196 - 1363504 | 10963.3 |
| hypothetical protein | BST98_RS06500 | Not Available | Positive | 1363777 - 1364412 | 24114.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

