Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS06400 | Not Available | Positive | 1340497 - 1341030 | 20192.6 |
| hypothetical protein | BST98_RS06405 | Not Available | Positive | 1341565 - 1342131 | 21920.8 |
| hypothetical protein | BST98_RS06410 | Not Available | Negative | 1342353 - 1342604 | 9043.61 |
| phenylalanine--trna ligase subunit alpha | BST98_RS06415 | Not Available | Positive | 1342905 - 1343888 | 37280.4 |
| phenylalanine--trna ligase subunit beta | BST98_RS06420 | Not Available | Positive | 1343908 - 1346295 | 86284.5 |
| integration host factor subunit alpha | BST98_RS06425 | Not Available | Positive | 1346818 - 1347114 | 11130.4 |
| succinylglutamate desuccinylase | BST98_RS06430 | Not Available | Positive | 1347377 - 1348408 | 38945.2 |
| vitamin b12 abc transporter permease btuc | BST98_RS06435 | Not Available | Positive | 1348492 - 1349487 | 35711.7 |
| vitamin b12 abc transporter atp-binding protein btud | BST98_RS06440 | Not Available | Positive | 1349487 - 1350248 | 27703.8 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | BST98_RS06445 | Not Available | Positive | 1350347 - 1351486 | 42428.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

