Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein activator lpob | BST98_RS06200 | Not Available | Positive | 1295471 - 1296130 | 23987.4 |
| phosphotransferase | BST98_RS06205 | Not Available | Positive | 1296171 - 1297022 | 32510.0 |
| alpha/beta hydrolase ycfp | BST98_RS06210 | Not Available | Positive | 1297155 - 1297694 | 20730.6 |
| nad(p)/fad-dependent oxidoreductase | BST98_RS06215 | Not Available | Positive | 1297893 - 1299182 | 47312.5 |
| helix-turn-helix transcriptional regulator | BST98_RS06220 | Not Available | Negative | 1299224 - 1299886 | 25354.1 |
| hypothetical protein | BST98_RS06225 | Not Available | Positive | 1300141 - 1300611 | 17509.2 |
| hypothetical protein | BST98_RS06230 | Not Available | Positive | 1300765 - 1301259 | 17136.1 |
| molecular chaperone | BST98_RS06235 | Not Available | Positive | 1301412 - 1302050 | 23425.5 |
| fimbria/pilus periplasmic chaperone | BST98_RS06240 | Not Available | Positive | 1302078 - 1302740 | 24936.7 |
| fimbria/pilus outer membrane usher protein | BST98_RS06245 | Not Available | Positive | 1302743 - 1305244 | 92975.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

