Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa pyrophosphatase | BST98_RS06150 | Not Available | Negative | 1281660 - 1282259 | 22709.5 |
| aminodeoxychorismate synthase component i | BST98_RS06155 | Not Available | Negative | 1282324 - 1283733 | 52826.5 |
| fumarate hydratase | BST98_RS06160 | Not Available | Positive | 1283896 - 1285413 | 54524.5 |
| efflux rnd transporter periplasmic adaptor subunit | BST98_RS06165 | Not Available | Positive | 1285798 - 1286835 | 38069.6 |
| efflux rnd transporter periplasmic adaptor subunit | BST98_RS06170 | Not Available | Positive | 1286837 - 1287931 | 40000.0 |
| efflux rnd transporter permease subunit | BST98_RS06175 | Not Available | Positive | 1287931 - 1291005 | 113491.0 |
| dihydroorotase | BST98_RS06180 | Not Available | Negative | 1291136 - 1292164 | 37670.0 |
| methyl-accepting chemotaxis protein | BST98_RS06185 | Not Available | Negative | 1292299 - 1294302 | 74431.3 |
| purine nucleoside phosphoramidase | BST98_RS06190 | Not Available | Positive | 1294536 - 1294886 | 13127.2 |
| ycfl family protein | BST98_RS06195 | Not Available | Positive | 1295009 - 1295392 | 13717.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

