Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | BST98_RS06100 | Not Available | Negative | 1270379 - 1271053 | 25433.7 |
| aspartate:alanine antiporter | BST98_RS06105 | Not Available | Negative | 1271283 - 1272965 | 60499.1 |
| grxa family glutaredoxin | BST98_RS06110 | Not Available | Negative | 1273280 - 1273546 | 10032.0 |
| iron-containing alcohol dehydrogenase | BST98_RS06115 | Not Available | Positive | 1273919 - 1275136 | 43867.2 |
| acetate uptake transporter | BST98_RS06120 | Not Available | Positive | 1275604 - 1276191 | 20949.3 |
| duf3861 domain-containing protein | BST98_RS06125 | Not Available | Negative | 1276273 - 1276590 | 12050.6 |
| marr family winged helix-turn-helix transcriptional regulator | BST98_RS06130 | Not Available | Positive | 1276697 - 1277128 | 16489.2 |
| arac family transcriptional regulator | BST98_RS06135 | Not Available | Negative | 1277200 - 1278078 | 33212.9 |
| l-serine ammonia-lyase | BST98_RS06140 | Not Available | Negative | 1278618 - 1279979 | 48936.9 |
| aromatic amino acid transport family protein | BST98_RS06145 | Not Available | Negative | 1280216 - 1281469 | 44994.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

