Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | BST98_RS06050 | Not Available | Negative | 1256924 - 1257409 | 18443.3 |
| ribosomal protein s5-alanine n-acetyltransferase | BST98_RS06055 | Not Available | Positive | 1257479 - 1258075 | 23453.1 |
| pyruvate kinase | BST98_RS06060 | Not Available | Negative | 1258201 - 1259646 | 51426.2 |
| murr/rpir family transcriptional regulator | BST98_RS06065 | Not Available | Negative | 1260046 - 1260900 | 31504.7 |
| sdr family oxidoreductase | BST98_RS06070 | Not Available | Positive | 1261278 - 1262126 | 31250.5 |
| m20 family metallopeptidase | BST98_RS06075 | Not Available | Positive | 1263044 - 1264174 | 40850.7 |
| tetr/acrr family transcriptional regulator | BST98_RS06080 | Not Available | Positive | 1264493 - 1265161 | 25334.6 |
| acyl-coa dehydrogenase | BST98_RS06085 | Not Available | Positive | 1265278 - 1267554 | 83217.0 |
| enoyl-acp reductase fabv | BST98_RS06090 | Not Available | Positive | 1267747 - 1268949 | 44188.6 |
| atp-binding protein | BST98_RS06095 | Not Available | Negative | 1269023 - 1270369 | 50630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

