Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BST98_RS06000 | Not Available | Negative | 1246025 - 1246987 | 35815.2 |
| abc transporter substrate-binding protein sapa | BST98_RS06005 | Not Available | Negative | 1246991 - 1248610 | 60360.6 |
| phage shock protein operon transcriptional activator | BST98_RS06010 | Not Available | Negative | 1248756 - 1249763 | 38008.3 |
| phage shock protein pspa | BST98_RS06015 | Not Available | Positive | 1249997 - 1250662 | 25376.1 |
| envelope stress response membrane protein pspb | BST98_RS06020 | Not Available | Positive | 1250729 - 1250956 | 8752.9 |
| envelope stress response membrane protein pspc | BST98_RS06025 | Not Available | Positive | 1250956 - 1251342 | 14657.9 |
| ycjx family protein | BST98_RS06030 | Not Available | Positive | 1251592 - 1252986 | 53307.1 |
| ycjf family protein | BST98_RS06035 | Not Available | Positive | 1252986 - 1254014 | 38070.1 |
| lysr family transcriptional regulator | BST98_RS06040 | Not Available | Positive | 1254137 - 1255060 | 35181.4 |
| transcriptional regulator tyrr | BST98_RS06045 | Not Available | Positive | 1255280 - 1256821 | 58163.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

