Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | BST98_RS05850 | Not Available | Positive | 1215555 - 1216778 | 42907.6 |
| hypothetical protein | BST98_RS05855 | Not Available | Positive | 1216942 - 1217217 | 10669.0 |
| duf805 domain-containing protein | BST98_RS05860 | Not Available | Positive | 1217238 - 1217633 | 14922.4 |
| fad-dependent oxidoreductase | BST98_RS05865 | Not Available | Negative | 1217719 - 1219371 | 60077.5 |
| atpase | BST98_RS05870 | Not Available | Positive | 1219592 - 1220005 | 14481.3 |
| yeee/yede family protein | BST98_RS05875 | Not Available | Positive | 1220022 - 1220456 | 15423.5 |
| hypothetical protein | BST98_RS05880 | Not Available | Positive | 1220537 - 1220773 | 8601.37 |
| amino acid permease | BST98_RS05885 | Not Available | Positive | 1221264 - 1222442 | 41462.6 |
| duf4922 domain-containing protein | BST98_RS05890 | Not Available | Positive | 1222817 - 1223623 | 30638.8 |
| c40 family peptidase | BST98_RS05895 | Not Available | Negative | 1223688 - 1224215 | 19470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

