Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| meta domain-containing protein | BST98_RS05800 | Not Available | Negative | 1203483 - 1203935 | 16135.5 |
| mechanosensitive ion channel family protein | BST98_RS05805 | Not Available | Negative | 1204328 - 1205971 | 62098.2 |
| hypothetical protein | BST98_RS05810 | Not Available | Negative | 1206139 - 1206525 | 14847.1 |
| ggdef domain-containing protein | BST98_RS05815 | Not Available | Positive | 1206862 - 1208511 | 63663.1 |
| phosphate abc transporter atp-binding protein pstb | BST98_RS05820 | Not Available | Negative | 1208651 - 1209400 | 28055.0 |
| phosphate abc transporter permease psta | BST98_RS05825 | Not Available | Negative | 1209423 - 1210289 | 31603.3 |
| phosphate abc transporter permease subunit pstc | BST98_RS05830 | Not Available | Negative | 1210295 - 1211209 | 32107.6 |
| phosphate abc transporter substrate-binding protein | BST98_RS05835 | Not Available | Negative | 1211296 - 1212117 | 28520.9 |
| methyl-accepting chemotaxis protein | BST98_RS05840 | Not Available | Positive | 1212512 - 1214140 | 59452.6 |
| lysr family transcriptional regulator | BST98_RS05845 | Not Available | Positive | 1214246 - 1215166 | 34852.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

