Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BST98_RS05750 | Not Available | Positive | 1192017 - 1193225 | 43979.8 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit glpc | BST98_RS05755 | Not Available | Negative | 1193310 - 1194521 | 45224.7 |
| glycerol-3-phosphate dehydrogenase subunit glpb | BST98_RS05760 | Not Available | Negative | 1194518 - 1195840 | 48841.8 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | BST98_RS05765 | Not Available | Negative | 1195837 - 1197498 | 61271.1 |
| duf1496 domain-containing protein | BST98_RS05770 | Not Available | Positive | 1197761 - 1198036 | 10015.1 |
| hypothetical protein | BST98_RS05775 | Not Available | Negative | 1198125 - 1198679 | 20602.4 |
| hypothetical protein | BST98_RS05780 | Not Available | Positive | 1198822 - 1199496 | 24023.8 |
| duf4250 domain-containing protein | BST98_RS05785 | Not Available | Positive | 1199642 - 1199830 | 7260.72 |
| lysr substrate-binding domain-containing protein | BST98_RS05790 | Not Available | Negative | 1199890 - 1200813 | 34839.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | BST98_RS05795 | Not Available | Positive | 1201028 - 1203337 | 86825.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

