Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS05645 | Not Available | Positive | 1178731 - 1179024 | 10831.1 |
| hypothetical protein | BST98_RS05650 | Not Available | Negative | 1179086 - 1179319 | 8974.97 |
| lysophospholipid acyltransferase family protein | BST98_RS05655 | Not Available | Negative | 1179398 - 1181161 | 66046.7 |
| yhs domain-containing (seleno)protein | BST98_RS05660 | Not Available | Negative | 1181175 - 1181612 | 16418.4 |
| d-alanine--d-alanine ligase | BST98_RS05665 | Not Available | Negative | 1181628 - 1182692 | 40392.1 |
| deda family protein | BST98_RS05670 | Not Available | Negative | 1182692 - 1183237 | 20744.0 |
| gaf domain-containing protein | BST98_RS05675 | Not Available | Positive | 1183391 - 1183855 | 17456.8 |
| sugar o-acetyltransferase | BST98_RS05680 | Not Available | Negative | 1183856 - 1184473 | 23201.8 |
| n(4)-acetylcytidine aminohydrolase | BST98_RS05685 | Not Available | Positive | 1184710 - 1185042 | 12884.4 |
| Trna-ser | Not Available | Not Available | Positive | 1185168 - 1185258 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

