Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nyn domain-containing protein | BST98_RS05600 | Not Available | Negative | 1168086 - 1168565 | 18142.5 |
| hypothetical protein | BST98_RS05605 | Not Available | Negative | 1168645 - 1168926 | 10315.9 |
| yggn family protein | BST98_RS05610 | Not Available | Positive | 1169068 - 1169811 | 27339.6 |
| hypothetical protein | BST98_RS22295 | Not Available | Positive | 1170014 - 1170169 | 5535.38 |
| phospholipase a | BST98_RS05615 | Not Available | Negative | 1170161 - 1171153 | 38236.8 |
| ygiq family radical sam protein | BST98_RS05620 | Not Available | Negative | 1171311 - 1173704 | 89368.5 |
| hypothetical protein | BST98_RS05625 | Not Available | Negative | 1174172 - 1174369 | 7728.57 |
| hypothetical protein | BST98_RS05630 | Not Available | Negative | 1174581 - 1174916 | 12346.9 |
| hypothetical protein | BST98_RS05635 | Not Available | Negative | 1175368 - 1176885 | 58135.4 |
| hypothetical protein | BST98_RS22670 | Not Available | Negative | 1177836 - 1178057 | 8547.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

