Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | BST98_RS05450 | Not Available | Negative | 1136760 - 1137305 | 20722.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | BST98_RS05455 | Not Available | Negative | 1137316 - 1137828 | 19360.2 |
| hypothetical protein | BST98_RS05460 | Not Available | Positive | 1138272 - 1138757 | 18564.0 |
| endonuclease/exonuclease/phosphatase family protein | BST98_RS05465 | Not Available | Positive | 1138790 - 1139890 | 40875.5 |
| duf2541 family protein | BST98_RS05470 | Not Available | Negative | 1140029 - 1140490 | 16491.9 |
| ammememoradisam system protein a | BST98_RS05475 | Not Available | Negative | 1140619 - 1141245 | 23749.8 |
| glutaredoxin domain-containing protein | BST98_RS05480 | Not Available | Positive | 1141511 - 1141819 | 11469.6 |
| bcct family transporter | BST98_RS05485 | Not Available | Positive | 1142170 - 1143744 | 56802.9 |
| 3'-5' exonuclease | BST98_RS05490 | Not Available | Negative | 1143808 - 1144536 | 27872.5 |
| duf294 nucleotidyltransferase-like domain-containing protein | BST98_RS05495 | Not Available | Negative | 1144547 - 1146427 | 71330.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

