Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tmao reductase system sensor histidine kinase/response regulator tors | BST98_RS05400 | Not Available | Positive | 1118905 - 1121823 | 107575.0 |
| c69 family dipeptidase | BST98_RS05405 | Not Available | Positive | 1122021 - 1123496 | 54985.1 |
| elongation factor g | BST98_RS05410 | Not Available | Negative | 1123579 - 1125666 | 76260.7 |
| rna-binding s4 domain-containing protein | BST98_RS05415 | Not Available | Positive | 1126049 - 1126486 | 15792.0 |
| m15 family metallopeptidase | BST98_RS05420 | Not Available | Positive | 1126610 - 1127530 | 34557.3 |
| eal domain-containing protein | BST98_RS05425 | Not Available | Negative | 1127584 - 1128828 | 46737.2 |
| atp-binding protein | BST98_RS05430 | Not Available | Negative | 1128821 - 1132570 | 142066.0 |
| aldo/keto reductase | BST98_RS05435 | Not Available | Positive | 1133056 - 1133964 | 34127.8 |
| sulfurtransferase | BST98_RS05440 | Not Available | Negative | 1134060 - 1135364 | 48696.4 |
| meta domain-containing protein | BST98_RS05445 | Not Available | Positive | 1135647 - 1136666 | 37512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

