Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS05350 | Not Available | Negative | 1103180 - 1103377 | 7837.13 |
| peptidase u32 family protein | BST98_RS05355 | Not Available | Positive | 1103689 - 1105947 | 84637.6 |
| gnat family n-acetyltransferase | BST98_RS05360 | Not Available | Positive | 1106020 - 1106439 | 15413.5 |
| molybdopterin-dependent oxidoreductase | BST98_RS05365 | Not Available | Negative | 1106611 - 1109253 | 97279.2 |
| pentaheme c-type cytochrome torc | BST98_RS05370 | Not Available | Positive | 1109961 - 1111130 | 43410.0 |
| yccs family putative transporter | BST98_RS05375 | Not Available | Negative | 1111249 - 1113414 | 81736.5 |
| dna helicase iv | BST98_RS05380 | Not Available | Positive | 1113737 - 1115842 | 80853.2 |
| alcohol dehydrogenase catalytic domain-containing protein | BST98_RS05385 | Not Available | Negative | 1115899 - 1116888 | 35779.6 |
| methylglyoxal synthase | BST98_RS05390 | Not Available | Negative | 1117102 - 1117560 | 17071.6 |
| tmao reductase system periplasmic protein tort | BST98_RS05395 | Not Available | Negative | 1117677 - 1118750 | 40175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

