Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | BST98_RS05200 | Not Available | Positive | 1053643 - 1053879 | 8635.87 |
| beta-ketoacyl-acp synthase ii | BST98_RS05205 | Not Available | Positive | 1053964 - 1055202 | 42603.0 |
| aminodeoxychorismate lyase | BST98_RS05210 | Not Available | Positive | 1055336 - 1056145 | 30391.7 |
| endolytic transglycosylase mltg | BST98_RS05215 | Not Available | Positive | 1056139 - 1057152 | 37914.0 |
| dtmp kinase | BST98_RS05220 | Not Available | Positive | 1057149 - 1057778 | 23112.7 |
| dna polymerase iii subunit delta' | BST98_RS05225 | Not Available | Positive | 1057779 - 1058741 | 35732.1 |
| tatd family hydrolase | BST98_RS05230 | Not Available | Positive | 1058843 - 1059622 | 29266.1 |
| pts transporter subunit eiic | BST98_RS05235 | Not Available | Positive | 1060162 - 1061787 | 57824.2 |
| rdd family protein | BST98_RS05240 | Not Available | Positive | 1061787 - 1062254 | 17564.1 |
| pts glucose transporter subunit iibc | BST98_RS05245 | Not Available | Positive | 1062841 - 1064271 | 50395.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

