Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna translocase ftsk 4tm domain-containing protein | BST98_RS05050 | Not Available | Positive | 1014146 - 1017394 | 117049.0 |
| outer membrane lipoprotein chaperone lola | BST98_RS05055 | Not Available | Positive | 1017527 - 1018138 | 22675.7 |
| replication-associated recombination protein a | BST98_RS05060 | Not Available | Positive | 1018245 - 1019588 | 49878.2 |
| serine--trna ligase | BST98_RS05065 | Not Available | Positive | 1019773 - 1021083 | 49030.4 |
| hypothetical protein | BST98_RS05070 | Not Available | Negative | 1021132 - 1022001 | 34143.6 |
| dicarboxylate/amino acid:cation symporter | BST98_RS05075 | Not Available | Negative | 1022224 - 1023540 | 46190.7 |
| coa-disulfide reductase | BST98_RS05080 | Not Available | Negative | 1024043 - 1025371 | 47953.6 |
| l-cystine transporter | BST98_RS05085 | Not Available | Negative | 1025436 - 1026836 | 48976.6 |
| methionine--trna ligase | BST98_RS05090 | Not Available | Negative | 1027191 - 1029239 | 76911.5 |
| iron-sulfur cluster carrier protein apbc | BST98_RS05095 | Not Available | Positive | 1029486 - 1030571 | 38881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

