Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease glpg | BST98_RS00460 | Not Available | Positive | 91599 - 92444 | 31898.1 |
| glycerol-3-phosphate transporter | BST98_RS00465 | Not Available | Positive | 92773 - 94137 | 50626.2 |
| deor/glpr family transcriptional regulator | BST98_RS00470 | Not Available | Positive | 94274 - 95035 | 28202.8 |
| glycerol-3-phosphate dehydrogenase | BST98_RS00475 | Not Available | Positive | 95252 - 96769 | 56807.7 |
| flagellar basal body-associated protein flil | BST98_RS00480 | Not Available | Negative | 96847 - 97269 | 15772.4 |
| chorismate--pyruvate lyase family protein | BST98_RS00485 | Not Available | Positive | 97438 - 97980 | 20367.6 |
| 4-hydroxybenzoate octaprenyltransferase | BST98_RS00490 | Not Available | Positive | 97974 - 98837 | 32021.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | BST98_RS00495 | Not Available | Negative | 98930 - 101380 | 92427.1 |
| transcriptional repressor lexa | BST98_RS00500 | Not Available | Positive | 101749 - 102375 | 22879.6 |
| class i sam-dependent methyltransferase | BST98_RS00505 | Not Available | Positive | 102525 - 103322 | 30491.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

