Rhizobium leguminosarum strain Vaf-108

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum strain Vaf-108 is a Gram-negative, mesophilic bacterium that inhabits soil environments. This organism is a chemoheterotroph, deriving its energy from organic compounds. Its cellular arrangement consists of rod-shaped cells that exist as singles, and it possesses flagella, allowing for mobility in its aerobic habitat. One notable characteristic of R. leguminosarum Vaf-108 is its nonsporulating nature, which implies that it does not form spores for survival under unfavorable conditions. Instead, it maintains its viability through active growth and reproduction. The strain has three replicons and two membranes, typical features of many Gram-negative bacteria. Vaf-108 is primarily recognized for its symbiotic relationship with various host legumes, including Lens culinaris (lentil), Trifolium species (clovers), Medicago sativa (alfalfa), Lathyrus oleraceus (field pea), and Vavilovia formosa. This symbiosis is crucial for nitrogen fixation, wherein the bacterium converts atmospheric nitrogen into a form that can be utilized by the host plants, thereby enhancing soil fertility and promoting plant growth. The ecological significance of R. leguminosarum Vaf-108 lies in its role in sustainable agriculture. By establishing symbiotic relationships with legumes, it contributes to natural soil enrichment and reduces the need for chemical fertilizers, fostering healthier ecosystems and more sustainable farming practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
Strainstrain Vaf-108

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum strain Vaf-108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipSymbiotic
Host(s)Phaseolus vulgaris, Vicia, Lathyrus
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium leguminosarum strain Vaf-108 plasmid unnamed4, complete

Gene Summary

Adenine Count

54133 bp

Thymine Count

53833 bp

Guanine Count

85553 bp

Cytosine Count

84809 bp

Genome Length

278328 bp

Protein-coding Genes

265 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-f family atp-binding cassette domain-containing proteinBMW22_RS38425Not AvailablePositive182358 - 18398060030.9
voc family proteinBMW22_RS38430Not AvailablePositive184082 - 18447414089.0
is5/is1182 family transposaseBMW22_RS38435Not AvailablePositive184567 - 18515621140.1
duf1328 domain-containing proteinBMW22_RS38440Not AvailablePositive185256 - 1854205809.68
hypothetical proteinBMW22_RS38445Not AvailableNegative185501 - 18586013165.3
membrane proteinBMW22_RS38450Not AvailableNegative185881 - 1861297879.61
duf992 domain-containing proteinBMW22_RS38455Not AvailablePositive186721 - 18724217587.9
is5/is1182 family transposaseBMW22_RS38460Not AvailablePositive187319 - 1874294184.05
hypothetical proteinBMW22_RS38465Not AvailableNegative187502 - 18827228443.4
is5/is1182 family transposaseBMW22_RS45045Not AvailableNegative188333 - 1884343720.42

Displaying genes 421 – 430 of 841 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.