Aquibium oceanicum strain B7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Aquibium

Description

Aquibium oceanicum strain B7 is characterized by having two replicons, which is a notable feature of its genomic structure. The strain is cataloged under the accession numbers NZ_CP018171.1 and NZ_CP018172.1, indicating the availability of genomic data that can be utilized for further studies and comparisons within the context of microbial diversity. The presence of two replicons in Aquibium oceanicum strain B7 may suggest a complex regulatory system and the potential for a variety of metabolic pathways, which could enable the strain to adapt to different environmental conditions. The ability to maintain multiple replicons is often associated with enhanced genetic flexibility and resilience in fluctuating habitats. Understanding the genomic framework of this strain could provide insights into its ecological roles, particularly in marine environments where it may contribute to nutrient cycling or microbial community dynamics. The availability of its genome through the specified accessions allows for future research that could elucidate the functional capabilities of Aquibium oceanicum strain B7, including its interactions with other microorganisms and its potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusAquibium
SpeciesAquibium oceanicum
Strainstrain B7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquibium oceanicum strain B7 plasmid unnamed1, complete sequence.

Gene Summary

Adenine Count

33319 bp

Thymine Count

31870 bp

Guanine Count

50263 bp

Cytosine Count

50626 bp

Genome Length

166078 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudBSQ44_RS05180Not AvailableNegative1033955 - 103467725308.3
5-dehydro-4-deoxy-d-glucuronate isomeraseBSQ44_RS05185Not AvailableNegative1034710 - 103556731489.3
fadr/gntr family transcriptional regulatorBSQ44_RS05190Not AvailableNegative1035605 - 103637527837.8
trap transporter large permeaseBSQ44_RS05195Not AvailableNegative1036383 - 103766344677.5
trap transporter small permeaseBSQ44_RS05200Not AvailableNegative1037667 - 103825120898.7
trap transporter substrate-binding proteinBSQ44_RS05205Not AvailableNegative1038312 - 103928936060.9
glucuronate isomeraseBSQ44_RS05210Not AvailableNegative1039318 - 104072752662.0
septal ring lytic transglycosylase rlpa family proteinBSQ44_RS05215Not AvailablePositive1041125 - 104147812084.8
d-alanine:d-lactate ligase-like proteinBSQ44_RS05220Not AvailableNegative1041445 - 104253938929.4
smp-30/gluconolactonase/lre family proteinBSQ44_RS05225Not AvailableNegative1042673 - 104354531314.1

Displaying genes 1281 – 1290 of 5241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.