Sphingorhabdus lutea strain LPB0140

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lutea strain LPB0140 is characterized by having a single replicon, which is a notable trait for its genomic structure. The genetic information for this strain is documented under the accession number NZ_CP018154.1, indicating that its genomic sequence is available for further analysis and research. While specific ecological or biological roles of Sphingorhabdus lutea strain LPB0140 are not provided, the presence of a single replicon can suggest a streamlined genomic organization. This may influence its adaptability and metabolic capabilities in various environments, although specific ecological insights cannot be drawn from the available data. In summary, Sphingorhabdus lutea strain LPB0140 is defined by its single replicon and documented genomic sequence, which may offer avenues for future research into its ecological roles and potential applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lutea
Strainstrain LPB0140

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lutea strain LPB0140 chromosome, complete genome.

Gene Summary

Adenine Count

680779 bp

Thymine Count

684031 bp

Guanine Count

586195 bp

Cytosine Count

582036 bp

Genome Length

2533041 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-hydroxychromene-2-carboxylate isomeraseLPB140_RS04165Not AvailablePositive871435 - 87204322872.4
crotonase/enoyl-coa hydratase family proteinLPB140_RS04170Not AvailablePositive872064 - 87286729019.0
class ii aldolase/adducin family proteinLPB140_RS04175Not AvailablePositive872894 - 87365828423.2
(2fe-2s)-binding proteinLPB140_RS04180Not AvailablePositive873694 - 87425119824.7
hnh endonucleaseLPB140_RS04185Not AvailableNegative874276 - 87484221753.1
trna glutamyl-q(34) synthetase gluqrsLPB140_RS04190Not AvailablePositive874972 - 87594936724.4
hig1 domain-containing proteinLPB140_RS04195Not AvailablePositive876059 - 8762868032.21
cob(i)yrinic acid a,c-diamide adenosyltransferaseLPB140_RS04200Not AvailablePositive876324 - 87693521768.0
hypothetical proteinLPB140_RS04205Not AvailableNegative876959 - 87784332592.8
energy transducer tonbLPB140_RS04210Not AvailablePositive878202 - 87888824625.2

Displaying genes 851 – 860 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.