Sphingorhabdus lutea strain LPB0140

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lutea strain LPB0140 is characterized by having a single replicon, which is a notable trait for its genomic structure. The genetic information for this strain is documented under the accession number NZ_CP018154.1, indicating that its genomic sequence is available for further analysis and research. While specific ecological or biological roles of Sphingorhabdus lutea strain LPB0140 are not provided, the presence of a single replicon can suggest a streamlined genomic organization. This may influence its adaptability and metabolic capabilities in various environments, although specific ecological insights cannot be drawn from the available data. In summary, Sphingorhabdus lutea strain LPB0140 is defined by its single replicon and documented genomic sequence, which may offer avenues for future research into its ecological roles and potential applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lutea
Strainstrain LPB0140

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lutea strain LPB0140 chromosome, complete genome.

Gene Summary

Adenine Count

680779 bp

Thymine Count

684031 bp

Guanine Count

586195 bp

Cytosine Count

582036 bp

Genome Length

2533041 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate, water dikinase regulatory proteinLPB140_RS01695Not AvailableNegative343157 - 34402632451.7
uroporphyrinogen decarboxylaseLPB140_RS01700Not AvailablePositive344392 - 34541437460.5
copd family proteinLPB140_RS01705Not AvailablePositive345432 - 34587517060.9
transcription termination factor rhoLPB140_RS01710Not AvailablePositive346113 - 34736946646.2
yjbe family putative metal transport proteinLPB140_RS01715Not AvailablePositive347398 - 34812625363.6
duf6489 family proteinLPB140_RS01720Not AvailablePositive348272 - 3485329384.36
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeLPB140_RS01725Not AvailablePositive348537 - 34982946779.1
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgLPB140_RS01730Not AvailablePositive349922 - 35180268287.1
16s rrna (guanine(527)-n(7))-methyltransferase rsmgLPB140_RS01735Not AvailablePositive351818 - 35247725285.5
para family proteinLPB140_RS01740Not AvailablePositive352474 - 35325628178.3

Displaying genes 361 – 370 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.