Sphingorhabdus lutea strain LPB0140

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lutea strain LPB0140 is characterized by having a single replicon, which is a notable trait for its genomic structure. The genetic information for this strain is documented under the accession number NZ_CP018154.1, indicating that its genomic sequence is available for further analysis and research. While specific ecological or biological roles of Sphingorhabdus lutea strain LPB0140 are not provided, the presence of a single replicon can suggest a streamlined genomic organization. This may influence its adaptability and metabolic capabilities in various environments, although specific ecological insights cannot be drawn from the available data. In summary, Sphingorhabdus lutea strain LPB0140 is defined by its single replicon and documented genomic sequence, which may offer avenues for future research into its ecological roles and potential applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lutea
Strainstrain LPB0140

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lutea strain LPB0140 chromosome, complete genome.

Gene Summary

Adenine Count

680779 bp

Thymine Count

684031 bp

Guanine Count

586195 bp

Cytosine Count

582036 bp

Genome Length

2533041 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hupe/urej family proteinLPB140_RS01195Not AvailableNegative237788 - 23878636949.0
peptidyl-prolyl cis-trans isomeraseLPB140_RS01200Not AvailableNegative238789 - 23962531487.6
electron transfer flavoprotein-ubiquinone oxidoreductaseLPB140_RS01205Not AvailablePositive239832 - 24148460148.8
hypothetical proteinLPB140_RS01210Not AvailablePositive241563 - 24198515302.4
hypothetical proteinLPB140_RS12420Not AvailablePositive242133 - 2423005893.31
llm class flavin-dependent oxidoreductaseLPB140_RS01220Not AvailableNegative242412 - 24350940408.1
aldo/keto reductase family oxidoreductaseLPB140_RS01225Not AvailableNegative243506 - 24441433164.7
laci family dna-binding transcriptional regulatorLPB140_RS01230Not AvailableNegative244454 - 24546136905.1
alpha-glucosidaseLPB140_RS01235Not AvailableNegative245454 - 24752377336.0
tonb-dependent receptorLPB140_RS01240Not AvailablePositive247796 - 25006080569.3

Displaying genes 261 – 270 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.