Sphingorhabdus lutea strain LPB0140

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lutea strain LPB0140 is characterized by having a single replicon, which is a notable trait for its genomic structure. The genetic information for this strain is documented under the accession number NZ_CP018154.1, indicating that its genomic sequence is available for further analysis and research. While specific ecological or biological roles of Sphingorhabdus lutea strain LPB0140 are not provided, the presence of a single replicon can suggest a streamlined genomic organization. This may influence its adaptability and metabolic capabilities in various environments, although specific ecological insights cannot be drawn from the available data. In summary, Sphingorhabdus lutea strain LPB0140 is defined by its single replicon and documented genomic sequence, which may offer avenues for future research into its ecological roles and potential applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lutea
Strainstrain LPB0140

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lutea strain LPB0140 chromosome, complete genome.

Gene Summary

Adenine Count

680779 bp

Thymine Count

684031 bp

Guanine Count

586195 bp

Cytosine Count

582036 bp

Genome Length

2533041 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration dna helicase ruvbLPB140_RS11870Not AvailableNegative2477207 - 247823837660.8
holliday junction branch migration protein ruvaLPB140_RS11875Not AvailableNegative2478235 - 247887021302.5
crossover junction endodeoxyribonuclease ruvcLPB140_RS11880Not AvailableNegative2479005 - 247946916210.9
acyl-coa desaturaseLPB140_RS11885Not AvailableNegative2479514 - 248056039257.1
yebc/pmpr family dna-binding transcriptional regulatorLPB140_RS11890Not AvailableNegative2480738 - 248148126942.6
ybjq family proteinLPB140_RS11895Not AvailableNegative2481587 - 248190411254.8
duf2312 domain-containing proteinLPB140_RS11900Not AvailableNegative2481953 - 24821959278.12
pyruvate kinaseLPB140_RS11905Not AvailablePositive2482395 - 248386753014.3
outer membrane beta-barrel proteinLPB140_RS11910Not AvailableNegative2483988 - 248450617785.9
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaLPB140_RS11915Not AvailableNegative2484678 - 248570937909.5

Displaying genes 2361 – 2370 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.