Sphingorhabdus lutea strain LPB0140

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lutea strain LPB0140 is characterized by having a single replicon, which is a notable trait for its genomic structure. The genetic information for this strain is documented under the accession number NZ_CP018154.1, indicating that its genomic sequence is available for further analysis and research. While specific ecological or biological roles of Sphingorhabdus lutea strain LPB0140 are not provided, the presence of a single replicon can suggest a streamlined genomic organization. This may influence its adaptability and metabolic capabilities in various environments, although specific ecological insights cannot be drawn from the available data. In summary, Sphingorhabdus lutea strain LPB0140 is defined by its single replicon and documented genomic sequence, which may offer avenues for future research into its ecological roles and potential applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lutea
Strainstrain LPB0140

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lutea strain LPB0140 chromosome, complete genome.

Gene Summary

Adenine Count

680779 bp

Thymine Count

684031 bp

Guanine Count

586195 bp

Cytosine Count

582036 bp

Genome Length

2533041 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase domain-containing proteinLPB140_RS07775Not AvailablePositive1627405 - 162842437526.2
septal ring lytic transglycosylase rlpa family proteinLPB140_RS12450Not AvailablePositive1628408 - 162945136963.8
d-alanyl-d-alanine carboxypeptidase family proteinLPB140_RS07785Not AvailablePositive1629491 - 163063941563.1
dtmp kinaseLPB140_RS07790Not AvailablePositive1630657 - 163129823453.9
aaa family atpaseLPB140_RS07795Not AvailablePositive1631295 - 163226336801.6
methionine--trna ligaseLPB140_RS07800Not AvailablePositive1632299 - 163386459444.8
tatd family hydrolaseLPB140_RS07805Not AvailablePositive1633874 - 163465028758.2
hypothetical proteinLPB140_RS12360Not AvailablePositive1634662 - 16348295844.54
nucleoside triphosphate pyrophosphohydrolaseLPB140_RS07810Not AvailablePositive1634941 - 163575031475.1
gtpase hflxLPB140_RS07815Not AvailableNegative1635747 - 163709950310.4

Displaying genes 1571 – 1580 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.