Sphingorhabdus lutea strain LPB0140

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lutea strain LPB0140 is characterized by having a single replicon, which is a notable trait for its genomic structure. The genetic information for this strain is documented under the accession number NZ_CP018154.1, indicating that its genomic sequence is available for further analysis and research. While specific ecological or biological roles of Sphingorhabdus lutea strain LPB0140 are not provided, the presence of a single replicon can suggest a streamlined genomic organization. This may influence its adaptability and metabolic capabilities in various environments, although specific ecological insights cannot be drawn from the available data. In summary, Sphingorhabdus lutea strain LPB0140 is defined by its single replicon and documented genomic sequence, which may offer avenues for future research into its ecological roles and potential applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lutea
Strainstrain LPB0140

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lutea strain LPB0140 chromosome, complete genome.

Gene Summary

Adenine Count

680779 bp

Thymine Count

684031 bp

Guanine Count

586195 bp

Cytosine Count

582036 bp

Genome Length

2533041 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLPB140_RS00595Not AvailableNegative106175 - 10707433304.0
3-methyl-2-oxobutanoate hydroxymethyltransferaseLPB140_RS00600Not AvailablePositive107218 - 10808430924.5
tetratricopeptide repeat proteinLPB140_RS00605Not AvailablePositive108151 - 10895429133.8
pqq-binding-like beta-propeller repeat proteinLPB140_RS00610Not AvailablePositive108957 - 11028846264.9
ribosome biogenesis gtpase derLPB140_RS00615Not AvailablePositive110350 - 11176251866.7
glycosyltransferaseLPB140_RS00620Not AvailablePositive111890 - 11272332081.5
protein adenylyltransferase seloLPB140_RS00625Not AvailableNegative112728 - 11419754199.8
peptide-methionine (r)-s-oxide reductase msrbLPB140_RS00630Not AvailableNegative114206 - 11465216524.4
ankyrin repeat domain-containing proteinLPB140_RS00635Not AvailableNegative114686 - 11540825984.1
sco family proteinLPB140_RS00640Not AvailablePositive115474 - 11612123201.7

Displaying genes 141 – 150 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.