Sphingorhabdus lutea strain LPB0140

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lutea strain LPB0140 is characterized by having a single replicon, which is a notable trait for its genomic structure. The genetic information for this strain is documented under the accession number NZ_CP018154.1, indicating that its genomic sequence is available for further analysis and research. While specific ecological or biological roles of Sphingorhabdus lutea strain LPB0140 are not provided, the presence of a single replicon can suggest a streamlined genomic organization. This may influence its adaptability and metabolic capabilities in various environments, although specific ecological insights cannot be drawn from the available data. In summary, Sphingorhabdus lutea strain LPB0140 is defined by its single replicon and documented genomic sequence, which may offer avenues for future research into its ecological roles and potential applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lutea
Strainstrain LPB0140

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lutea strain LPB0140 chromosome, complete genome.

Gene Summary

Adenine Count

680779 bp

Thymine Count

684031 bp

Guanine Count

586195 bp

Cytosine Count

582036 bp

Genome Length

2533041 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinLPB140_RS05125Not AvailablePositive1078047 - 107928545284.0
tetratricopeptide repeat proteinLPB140_RS05130Not AvailablePositive1079394 - 108047638639.4
ydiy family proteinLPB140_RS05135Not AvailableNegative1080494 - 108145934921.9
endonuclease/exonuclease/phosphatase family proteinLPB140_RS05140Not AvailableNegative1081552 - 108250536031.8
thioredoxin-disulfide reductaseLPB140_RS05145Not AvailableNegative1082636 - 108361034501.1
2fe-2s iron-sulfur cluster-binding proteinLPB140_RS05150Not AvailablePositive1083783 - 108410011414.3
hypothetical proteinLPB140_RS05155Not AvailableNegative1084097 - 108451316229.5
nupc/nupg family nucleoside cnt transporterLPB140_RS05160Not AvailableNegative1084551 - 108582845454.0
nudix hydrolaseLPB140_RS05165Not AvailableNegative1085832 - 108664129615.6
duf4126 domain-containing proteinLPB140_RS05170Not AvailablePositive1086762 - 108737321267.1

Displaying genes 1041 – 1050 of 2421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.