Synechococcus sp. SynAce01

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. SynAce01 is a Gram-negative cyanobacterium isolated from the Antarctic environment. This organism is characterized by the presence of flagella, which may facilitate its motility in the cold, nutrient-rich waters of its habitat. Notably, Synechococcus sp. SynAce01 has a single replicon, indicating a streamlined genomic structure that could be advantageous for efficient replication in extreme conditions. The accession number for this strain is NZ_CP018091.1, which provides access to its genetic information and can be used for further studies in microbial genetics and phylogeny. The Antarctic habitat of Synechococcus sp. SynAce01 suggests its adaptation to low temperatures and potentially high UV radiation levels, common in polar regions. Ecologically, cyanobacteria like Synechococcus sp. play a crucial role in primary production, contributing to the carbon cycle and serving as a food source for various marine organisms. The ability of Synechococcus sp. SynAce01 to thrive in extreme environments highlights the resilience and adaptability of microbial life, emphasizing the importance of such organisms in understanding ecological dynamics in polar ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. SynAce01
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. SynAce01
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAntarctic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. SynAce01 chromosome, complete genome.

Gene Summary

Adenine Count

499845 bp

Thymine Count

492702 bp

Guanine Count

877010 bp

Cytosine Count

881077 bp

Genome Length

2750634 bp

Protein-coding Genes

2840 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
j domain-containing proteinBM449_RS15475Not AvailablePositive2529770 - 253034221638.9
ppx/gppa phosphatase family proteinBM449_RS13150Not AvailableNegative2530729 - 253227957678.1
is3 family transposaseBM449_RS13160Not AvailablePositive2532410 - 253352143581.7
allophycocyanin subunit alpha-bBM449_RS13165Not AvailableNegative2534340 - 253483418089.9
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdBM449_RS13170Not AvailablePositive2534998 - 253637750057.3
phenylalanine--trna ligase subunit betaBM449_RS13175Not AvailableNegative2536367 - 253882686981.3
50s ribosomal protein l33BM449_RS13180Not AvailablePositive2538937 - 25391317421.05
30s ribosomal protein s18BM449_RS13185Not AvailablePositive2539221 - 25394428309.34
ribonuclease catalytic domain-containing proteinBM449_RS13190Not AvailablePositive2539451 - 254146973908.1
fad-dependent oxidoreductaseBM449_RS13195Not AvailableNegative2541471 - 254324363031.9

Displaying genes 2661 – 2670 of 2894 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.