Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BcFMB_RS03225 | Not Available | Positive | 836166 - 839084 | 105872.0 |
| amino acid permease | BcFMB_RS03230 | Not Available | Positive | 839346 - 840875 | 55900.0 |
| marr family winged helix-turn-helix transcriptional regulator | BcFMB_RS03235 | Not Available | Positive | 841361 - 841969 | 22693.0 |
| abc transporter atp-binding protein | BcFMB_RS03240 | Not Available | Positive | 842081 - 844000 | 70332.8 |
| abc transporter atp-binding protein | BcFMB_RS03245 | Not Available | Positive | 844067 - 845908 | 67492.9 |
| polysaccharide deacetylase family protein | BcFMB_RS03250 | Not Available | Negative | 845985 - 847454 | 52569.1 |
| hypothetical protein | BcFMB_RS03255 | Not Available | Negative | 847931 - 848422 | 18233.4 |
| phosphatase pap2 family protein | BcFMB_RS03260 | Not Available | Negative | 848422 - 849129 | 25391.5 |
| hypothetical protein | BcFMB_RS03265 | Not Available | Positive | 849242 - 849703 | 16580.3 |
| tetr/acrr family transcriptional regulator | BcFMB_RS03270 | Not Available | Negative | 849910 - 850533 | 22665.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


