Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | BcFMB_RS02975 | Not Available | Negative | 772357 - 773094 | 27387.3 |
| cupin domain-containing protein | BcFMB_RS02980 | Not Available | Negative | 773224 - 773667 | 15945.8 |
| alpha/beta hydrolase | BcFMB_RS02985 | Not Available | Negative | 773863 - 774849 | 35884.0 |
| lysr family transcriptional regulator | BcFMB_RS02990 | Not Available | Positive | 775017 - 775934 | 34453.3 |
| duf4234 domain-containing protein | BcFMB_RS09805 | Not Available | Negative | 775916 - 776632 | 26138.5 |
| hypothetical protein | BcFMB_RS03000 | Not Available | Negative | 776737 - 777123 | 13857.4 |
| flavodoxin | BcFMB_RS03005 | Not Available | Negative | 777280 - 777480 | 7355.43 |
| is256-like element is1249 family transposase | BcFMB_RS03010 | Not Available | Negative | 777576 - 778754 | 44842.6 |
| abc transporter substrate-binding protein | BcFMB_RS09695 | Not Available | Negative | 779064 - 779481 | 15003.9 |
| 23s ribosomal rna methyltransferase erm | BcFMB_RS03015 | Not Available | Negative | 779646 - 780500 | 31464.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


