Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | BcFMB_RS02925 | Not Available | Negative | 764204 - 765652 | 53427.9 |
| zinc metalloprotease htpx | BcFMB_RS02930 | Not Available | Positive | 765747 - 766703 | 34594.7 |
| protein-adp-ribose hydrolase | BcFMB_RS02935 | Not Available | Positive | 766916 - 767731 | 29548.4 |
| sir2 family nad-dependent protein deacylase | BcFMB_RS02940 | Not Available | Positive | 767728 - 768585 | 32202.1 |
| Trna-gly | Not Available | Not Available | Positive | 768656 - 768726 | Not Available |
| sos response-associated peptidase family protein | BcFMB_RS02950 | Not Available | Positive | 769055 - 769789 | 27394.6 |
| mfs transporter | BcFMB_RS02955 | Not Available | Positive | 769926 - 771134 | 41548.7 |
| hypothetical protein | BcFMB_RS09795 | Not Available | Positive | 771131 - 771277 | 5375.65 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | BcFMB_RS09800 | Not Available | Negative | 771240 - 771551 | 11705.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | BcFMB_RS02970 | Not Available | Negative | 771761 - 772243 | 17944.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


