Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | BcFMB_RS02485 | Not Available | Positive | 647377 - 649428 | 75710.1 |
| dna gyrase subunit a | BcFMB_RS02490 | Not Available | Positive | 649572 - 652253 | 99606.5 |
| duf3566 domain-containing protein | BcFMB_RS02495 | Not Available | Positive | 652402 - 652887 | 17322.6 |
| abc transporter substrate-binding protein | BcFMB_RS09790 | Not Available | Positive | 653371 - 653745 | 13939.2 |
| paqr family membrane homeostasis protein trha | BcFMB_RS02505 | Not Available | Negative | 654295 - 655095 | 30253.9 |
| nadp-specific glutamate dehydrogenase | BcFMB_RS02510 | Not Available | Negative | 655253 - 656599 | 48992.0 |
| mfs transporter | BcFMB_RS02515 | Not Available | Negative | 656764 - 657969 | 42829.6 |
| glycosyl hydrolase | BcFMB_RS02520 | Not Available | Positive | 658385 - 661510 | 111166.0 |
| large conductance mechanosensitive channel protein mscl | BcFMB_RS02525 | Not Available | Positive | 661813 - 662289 | 16881.6 |
| duf2207 domain-containing protein | BcFMB_RS02530 | Not Available | Negative | 662394 - 664253 | 67593.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


