Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 567289 - 568831 | Not Available |
| type ii toxin-antitoxin system yafq family toxin | BcFMB_RS02180 | Not Available | Negative | 569478 - 569726 | 9595.44 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | BcFMB_RS02185 | Not Available | Negative | 569783 - 570052 | 10150.0 |
| mfs transporter | BcFMB_RS02190 | Not Available | Negative | 570291 - 571676 | 48757.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 572180 - 572296 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 572490 - 575571 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 576123 - 577665 | Not Available |
| dha2 family efflux mfs transporter permease subunit | BcFMB_RS02215 | Not Available | Positive | 578422 - 579921 | 52151.4 |
| sir2 family nad-dependent protein deacylase | BcFMB_RS02220 | Not Available | Positive | 580122 - 580883 | 27801.1 |
| duf3021 domain-containing protein | BcFMB_RS02225 | Not Available | Negative | 580973 - 581449 | 17024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


