Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | BcFMB_RS01120 | Not Available | Positive | 293229 - 294104 | 31303.7 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | BcFMB_RS01125 | Not Available | Positive | 294117 - 294767 | 22848.1 |
| atp-binding cassette domain-containing protein | BcFMB_RS01130 | Not Available | Negative | 294853 - 298470 | 129710.0 |
| amp-dependent synthetase/ligase | BcFMB_RS01135 | Not Available | Positive | 298730 - 300550 | 65570.4 |
| duf4422 domain-containing protein | BcFMB_RS01140 | Not Available | Positive | 300564 - 301154 | 22967.5 |
| low molecular weight phosphatase family protein | BcFMB_RS01145 | Not Available | Positive | 301151 - 301714 | 20416.5 |
| beta-1,6-n-acetylglucosaminyltransferase | BcFMB_RS01150 | Not Available | Negative | 301719 - 302585 | 33337.5 |
| glycosyltransferase family 2 protein | BcFMB_RS01155 | Not Available | Negative | 302622 - 303620 | 36878.9 |
| polysaccharide pyruvyl transferase family protein | BcFMB_RS01160 | Not Available | Positive | 303759 - 304739 | 37531.0 |
| lipopolysaccharide biosynthesis protein | BcFMB_RS01165 | Not Available | Positive | 304736 - 306277 | 56926.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


