Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BcFMB_RS00620 | Not Available | Negative | 137599 - 139527 | 71705.4 |
| marr family winged helix-turn-helix transcriptional regulator | BcFMB_RS00625 | Not Available | Negative | 139623 - 140360 | 27118.2 |
| nadph-dependent fmn reductase | BcFMB_RS00630 | Not Available | Negative | 141004 - 141570 | 20588.1 |
| type i-e crispr-associated endoribonuclease cas2e | BcFMB_RS00635 | Not Available | Negative | 146945 - 147322 | 14193.0 |
| type i-e crispr-associated endonuclease cas1e | BcFMB_RS00640 | Not Available | Negative | 147326 - 148285 | 35361.8 |
| type i-e crispr-associated protein cas6/cse3/case | BcFMB_RS00645 | Not Available | Negative | 148431 - 149141 | 26976.0 |
| type i-e crispr-associated protein cas5/casd | BcFMB_RS00650 | Not Available | Negative | 149157 - 149900 | 28086.9 |
| type i-e crispr-associated protein cas7/cse4/casc | BcFMB_RS00655 | Not Available | Negative | 149908 - 151038 | 40792.9 |
| type i-e crispr-associated protein cse2/casb | BcFMB_RS00660 | Not Available | Negative | 151124 - 151759 | 23354.7 |
| type i-e crispr-associated protein cse1/casa | BcFMB_RS00665 | Not Available | Negative | 151749 - 153473 | 63783.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


