Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | BcFMB_RS06730 | Not Available | Positive | 1667372 - 1668049 | 24950.9 |
| duf948 domain-containing protein | BcFMB_RS06735 | Not Available | Positive | 1668138 - 1668542 | 13796.6 |
| hypothetical protein | BcFMB_RS06740 | Not Available | Positive | 1668546 - 1668782 | 8761.78 |
| alanine--trna ligase | BcFMB_RS06745 | Not Available | Positive | 1668884 - 1671580 | 98442.8 |
| holliday junction resolvase ruvx | BcFMB_RS06750 | Not Available | Positive | 1671593 - 1672069 | 17440.8 |
| endolytic transglycosylase mltg | BcFMB_RS06755 | Not Available | Positive | 1672072 - 1673271 | 43438.0 |
| prepilin peptidase | BcFMB_RS06760 | Not Available | Negative | 1673290 - 1673757 | 15950.2 |
| chorismate synthase | BcFMB_RS06765 | Not Available | Positive | 1673803 - 1674996 | 42410.7 |
| bifunctional shikimate kinase/3-dehydroquinate synthase | BcFMB_RS06770 | Not Available | Positive | 1675015 - 1676673 | 60271.1 |
| type ii 3-dehydroquinate dehydratase | BcFMB_RS06775 | Not Available | Positive | 1676744 - 1677205 | 16820.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


