Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BcFMB_RS00125 | Not Available | Negative | 20765 - 21871 | 39736.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BcFMB_RS00130 | Not Available | Negative | 21918 - 23405 | 51440.0 |
| udp-n-acetylmuramyl peptide synthase | BcFMB_RS00135 | Not Available | Negative | 23468 - 24343 | 31007.9 |
| peptidoglycan d,d-transpeptidase ftsi family protein | BcFMB_RS00140 | Not Available | Negative | 24384 - 26183 | 63680.8 |
| hypothetical protein | BcFMB_RS00145 | Not Available | Negative | 26190 - 26654 | 16935.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | BcFMB_RS00150 | Not Available | Negative | 26657 - 27742 | 39637.4 |
| division/cell wall cluster transcriptional repressor mraz | BcFMB_RS00155 | Not Available | Negative | 27751 - 28272 | 19200.9 |
| held family protein | BcFMB_RS00160 | Not Available | Positive | 28501 - 30747 | 82566.0 |
| phosphoglycerate dehydrogenase | BcFMB_RS00165 | Not Available | Positive | 30758 - 31960 | 43176.8 |
| transcriptional regulator nrdr | BcFMB_RS00170 | Not Available | Negative | 32074 - 32520 | 16973.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


