Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | strain FMB-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386891 bp
Thymine Count
386420 bp
Guanine Count
738911 bp
Cytosine Count
734060 bp
Genome Length
2246282 bp
Protein-coding Genes
1767 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rusa family crossover junction endodeoxyribonuclease | BcFMB_RS00035 | Not Available | Negative | 5113 - 5613 | 19387.1 |
| hypothetical protein | BcFMB_RS09425 | Not Available | Negative | 5610 - 5837 | 7812.58 |
| hypothetical protein | BcFMB_RS00040 | Not Available | Negative | 5830 - 6138 | 11665.7 |
| helix-turn-helix domain-containing protein | BcFMB_RS00045 | Not Available | Negative | 6135 - 6353 | 8107.96 |
| hypothetical protein | BcFMB_RS00050 | Not Available | Negative | 6350 - 6601 | 9378.67 |
| phage antirepressor kilac domain-containing protein | BcFMB_RS00055 | Not Available | Negative | 6598 - 7386 | 29310.8 |
| helix-turn-helix domain-containing protein | BcFMB_RS00060 | Not Available | Negative | 7400 - 7654 | 9284.15 |
| helix-turn-helix domain-containing protein | BcFMB_RS00065 | Not Available | Positive | 7799 - 8179 | 13847.0 |
| hypothetical protein | BcFMB_RS00070 | Not Available | Positive | 8378 - 8572 | 7066.55 |
| imma/irre family metallo-endopeptidase | BcFMB_RS00075 | Not Available | Positive | 8684 - 9058 | 14426.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


