Vibrio syngnathi strain K08M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio syngnathi strain K08M4 is characterized by having a single replicon, suggesting a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP017916.1, which provides a reference for its genetic information in public databases. Vibrio syngnathi, as a member of the Vibrio genus, is typically associated with aquatic environments and is known for its role in various ecological interactions. While the specific ecological functions of strain K08M4 are not detailed in the data provided, members of this genus are often involved in nutrient cycling and can impact the health of marine ecosystems. The presence of a single replicon in K08M4 may indicate specific adaptations to its niche, potentially influencing its growth and survival strategies in the aquatic environment. Further research into this strain could elucidate its role in microbial communities and its interactions with other marine organisms, contributing to a more comprehensive understanding of the ecological dynamics of Vibrio species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio syngnathi
Strainstrain K08M4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio syngnathi strain K08M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio syngnathi strain K08M4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

921938 bp

Thymine Count

918676 bp

Guanine Count

727743 bp

Cytosine Count

729971 bp

Genome Length

3298328 bp

Protein-coding Genes

2822 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate pyrophosphokinaseK08M4_RS03790Not AvailableNegative772741 - 77368534013.9
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseK08M4_RS03795Not AvailableNegative773713 - 77458831988.1
lipoprotein insertase outer membrane protein lolbK08M4_RS03800Not AvailableNegative774585 - 77525325059.7
glutamyl-trna reductaseK08M4_RS03805Not AvailablePositive775414 - 77667345621.8
peptide chain release factor 1K08M4_RS03810Not AvailablePositive776702 - 77779040340.4
peptide chain release factor n(5)-glutamine methyltransferaseK08M4_RS03815Not AvailablePositive777796 - 77866832200.1
sirb2 family proteinK08M4_RS03820Not AvailablePositive778877 - 77926014133.1
sirb1 family proteinK08M4_RS03825Not AvailablePositive779288 - 78009730917.8
3-deoxy-8-phosphooctulonate synthaseK08M4_RS03830Not AvailablePositive780120 - 78097431065.8
bifunctional udp-sugar hydrolase/5'-nucleotidase ushaK08M4_RS03835Not AvailablePositive781493 - 78315461145.1

Displaying genes 751 – 760 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.