Vibrio syngnathi strain K08M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio syngnathi strain K08M4 is characterized by having a single replicon, suggesting a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP017916.1, which provides a reference for its genetic information in public databases. Vibrio syngnathi, as a member of the Vibrio genus, is typically associated with aquatic environments and is known for its role in various ecological interactions. While the specific ecological functions of strain K08M4 are not detailed in the data provided, members of this genus are often involved in nutrient cycling and can impact the health of marine ecosystems. The presence of a single replicon in K08M4 may indicate specific adaptations to its niche, potentially influencing its growth and survival strategies in the aquatic environment. Further research into this strain could elucidate its role in microbial communities and its interactions with other marine organisms, contributing to a more comprehensive understanding of the ecological dynamics of Vibrio species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio syngnathi
Strainstrain K08M4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio syngnathi strain K08M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio syngnathi strain K08M4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

921938 bp

Thymine Count

918676 bp

Guanine Count

727743 bp

Cytosine Count

729971 bp

Genome Length

3298328 bp

Protein-coding Genes

2822 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan dd-metalloendopeptidase family proteinK08M4_RS03040Not AvailableNegative627362 - 62865147792.2
tyrosine--trna ligaseK08M4_RS03045Not AvailablePositive628781 - 62996843804.9
magnesium transporterK08M4_RS03050Not AvailablePositive630422 - 63126730623.8
serine-type d-ala-d-ala carboxypeptidaseK08M4_RS03055Not AvailableNegative631393 - 63282652424.5
porinK08M4_RS03060Not AvailableNegative632939 - 63398536755.7
transcription elongation factor greaK08M4_RS03065Not AvailablePositive634501 - 63497417585.0
ribosome assembly rna-binding protein yhbyK08M4_RS03070Not AvailableNegative635099 - 63539510985.7
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeK08M4_RS03075Not AvailablePositive635510 - 63613923353.1
atp-dependent zinc metalloprotease ftshK08M4_RS03080Not AvailablePositive636247 - 63821772310.7
dihydropteroate synthaseK08M4_RS03085Not AvailablePositive638306 - 63913630045.6

Displaying genes 601 – 610 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.