Vibrio syngnathi strain K08M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio syngnathi strain K08M4 is characterized by having a single replicon, suggesting a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP017916.1, which provides a reference for its genetic information in public databases. Vibrio syngnathi, as a member of the Vibrio genus, is typically associated with aquatic environments and is known for its role in various ecological interactions. While the specific ecological functions of strain K08M4 are not detailed in the data provided, members of this genus are often involved in nutrient cycling and can impact the health of marine ecosystems. The presence of a single replicon in K08M4 may indicate specific adaptations to its niche, potentially influencing its growth and survival strategies in the aquatic environment. Further research into this strain could elucidate its role in microbial communities and its interactions with other marine organisms, contributing to a more comprehensive understanding of the ecological dynamics of Vibrio species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio syngnathi
Strainstrain K08M4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio syngnathi strain K08M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio syngnathi strain K08M4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

921938 bp

Thymine Count

918676 bp

Guanine Count

727743 bp

Cytosine Count

729971 bp

Genome Length

3298328 bp

Protein-coding Genes

2822 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive2655436 - 2658328Not Available
Trna-alaNot AvailableNot AvailablePositive2658748 - 2658823Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive2658901 - 2660455Not Available
atp-dependent chaperone clpbK08M4_RS12110Not AvailableNegative2661069 - 266364295969.5
peptidoglycan editing factor pgefK08M4_RS12115Not AvailableNegative2663785 - 266452526481.4
23s rrna pseudouridine(1911/1915/1917) synthase rludK08M4_RS12120Not AvailableNegative2664528 - 266550236377.0
outer membrane protein assembly factor bamdK08M4_RS12125Not AvailablePositive2665640 - 266636827753.1
lytic transglycosylase fK08M4_RS12130Not AvailablePositive2666525 - 266794954316.6
ribosome hibernation-promoting factor, hpf/yfia familyK08M4_RS12135Not AvailablePositive2668537 - 266889013526.2
prephenate dehydrataseK08M4_RS12140Not AvailablePositive2669135 - 267031043896.6

Displaying genes 2411 – 2420 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.