Vibrio syngnathi strain K08M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio syngnathi strain K08M4 is characterized by having a single replicon, suggesting a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP017916.1, which provides a reference for its genetic information in public databases. Vibrio syngnathi, as a member of the Vibrio genus, is typically associated with aquatic environments and is known for its role in various ecological interactions. While the specific ecological functions of strain K08M4 are not detailed in the data provided, members of this genus are often involved in nutrient cycling and can impact the health of marine ecosystems. The presence of a single replicon in K08M4 may indicate specific adaptations to its niche, potentially influencing its growth and survival strategies in the aquatic environment. Further research into this strain could elucidate its role in microbial communities and its interactions with other marine organisms, contributing to a more comprehensive understanding of the ecological dynamics of Vibrio species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio syngnathi
Strainstrain K08M4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio syngnathi strain K08M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio syngnathi strain K08M4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

921938 bp

Thymine Count

918676 bp

Guanine Count

727743 bp

Cytosine Count

729971 bp

Genome Length

3298328 bp

Protein-coding Genes

2822 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(d)cmp kinaseK08M4_RS09785Not AvailableNegative2144576 - 214525624474.3
3-deoxy-manno-octulosonate cytidylyltransferaseK08M4_RS09790Not AvailableNegative2145535 - 214628127107.2
trm112 family proteinK08M4_RS09795Not AvailableNegative2146281 - 21464606684.3
tetraacyldisaccharide 4'-kinaseK08M4_RS09800Not AvailableNegative2146441 - 214744837435.0
lipid a abc transporter atp-binding protein/permease msbaK08M4_RS09805Not AvailableNegative2147463 - 214921164061.4
dna internalization-related competence protein comec/rec2K08M4_RS09810Not AvailableNegative2149243 - 215157387509.5
duf2062 domain-containing proteinK08M4_RS09815Not AvailablePositive2151591 - 215210319207.2
lipoprotein-releasing abc transporter permease subunit loleK08M4_RS09820Not AvailableNegative2152315 - 215355944845.3
lipoprotein-releasing abc transporter atp-binding protein loldK08M4_RS09825Not AvailableNegative2153560 - 215425225247.1
lipoprotein-releasing abc transporter permease subunit lolcK08M4_RS09830Not AvailableNegative2154245 - 215545343417.3

Displaying genes 1951 – 1960 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.