Vibrio syngnathi strain K08M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio syngnathi strain K08M4 is characterized by having a single replicon, suggesting a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP017916.1, which provides a reference for its genetic information in public databases. Vibrio syngnathi, as a member of the Vibrio genus, is typically associated with aquatic environments and is known for its role in various ecological interactions. While the specific ecological functions of strain K08M4 are not detailed in the data provided, members of this genus are often involved in nutrient cycling and can impact the health of marine ecosystems. The presence of a single replicon in K08M4 may indicate specific adaptations to its niche, potentially influencing its growth and survival strategies in the aquatic environment. Further research into this strain could elucidate its role in microbial communities and its interactions with other marine organisms, contributing to a more comprehensive understanding of the ecological dynamics of Vibrio species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio syngnathi
Strainstrain K08M4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio syngnathi strain K08M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio syngnathi strain K08M4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

921938 bp

Thymine Count

918676 bp

Guanine Count

727743 bp

Cytosine Count

729971 bp

Genome Length

3298328 bp

Protein-coding Genes

2822 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
envelope stress response membrane protein pspbK08M4_RS09330Not AvailableNegative2048522 - 20487559036.96
phage shock protein pspaK08M4_RS09335Not AvailableNegative2048771 - 204944225439.3
phage shock protein operon transcriptional activatorK08M4_RS09340Not AvailablePositive2049759 - 205078138334.8
abc transporter substrate-binding protein sapaK08M4_RS09345Not AvailablePositive2050884 - 205250660890.2
abc transporter permeaseK08M4_RS09350Not AvailablePositive2052506 - 205346835666.4
putrescine export abc transporter permease sapcK08M4_RS09355Not AvailablePositive2053455 - 205434232057.6
oligopeptide/dipeptide abc transporter atp-binding proteinK08M4_RS09360Not AvailablePositive2054342 - 205534337811.5
atp-binding cassette domain-containing proteinK08M4_RS09365Not AvailablePositive2055340 - 205612229165.7
duf2927 domain-containing proteinK08M4_RS09370Not AvailablePositive2056159 - 205693829184.3
duf2750 domain-containing proteinK08M4_RS09375Not AvailableNegative2057060 - 205744915042.5

Displaying genes 1861 – 1870 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.