Vibrio syngnathi strain K08M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio syngnathi strain K08M4 is characterized by having a single replicon, suggesting a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP017916.1, which provides a reference for its genetic information in public databases. Vibrio syngnathi, as a member of the Vibrio genus, is typically associated with aquatic environments and is known for its role in various ecological interactions. While the specific ecological functions of strain K08M4 are not detailed in the data provided, members of this genus are often involved in nutrient cycling and can impact the health of marine ecosystems. The presence of a single replicon in K08M4 may indicate specific adaptations to its niche, potentially influencing its growth and survival strategies in the aquatic environment. Further research into this strain could elucidate its role in microbial communities and its interactions with other marine organisms, contributing to a more comprehensive understanding of the ecological dynamics of Vibrio species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio syngnathi
Strainstrain K08M4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio syngnathi strain K08M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio syngnathi strain K08M4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

921938 bp

Thymine Count

918676 bp

Guanine Count

727743 bp

Cytosine Count

729971 bp

Genome Length

3298328 bp

Protein-coding Genes

2822 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imelysin family proteinK08M4_RS09035Not AvailableNegative1978885 - 198014445615.6
gtp cyclohydrolase iiK08M4_RS09040Not AvailableNegative1980340 - 198093622097.3
hypothetical proteinK08M4_RS22100Not AvailableNegative1981187 - 19813636787.0
cytochrome c-type biogenesis protein ccmhK08M4_RS09045Not AvailableNegative1981453 - 198189316524.3
dsbe family thiol:disulfide interchange proteinK08M4_RS09050Not AvailableNegative1981890 - 198244420077.0
heme lyase ccmf/nrfe family subunitK08M4_RS09055Not AvailableNegative1982425 - 198434771230.7
cytochrome c nitrite reductase subunit nrfdK08M4_RS09060Not AvailableNegative1984476 - 198545035883.9
cytochrome c nitrite reductase fe-s proteinK08M4_RS09065Not AvailableNegative1985453 - 198613924960.7
cytochrome c nitrite reductase pentaheme subunitK08M4_RS09070Not AvailableNegative1986143 - 198672721459.3
ammonia-forming nitrite reductase cytochrome c552 subunitK08M4_RS09075Not AvailablePositive1987209 - 198863953819.2

Displaying genes 1801 – 1810 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.