Vibrio syngnathi strain K08M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio syngnathi strain K08M4 is characterized by having a single replicon, suggesting a streamlined genomic organization. This strain is cataloged under the accession number NZ_CP017916.1, which provides a reference for its genetic information in public databases. Vibrio syngnathi, as a member of the Vibrio genus, is typically associated with aquatic environments and is known for its role in various ecological interactions. While the specific ecological functions of strain K08M4 are not detailed in the data provided, members of this genus are often involved in nutrient cycling and can impact the health of marine ecosystems. The presence of a single replicon in K08M4 may indicate specific adaptations to its niche, potentially influencing its growth and survival strategies in the aquatic environment. Further research into this strain could elucidate its role in microbial communities and its interactions with other marine organisms, contributing to a more comprehensive understanding of the ecological dynamics of Vibrio species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio syngnathi
Strainstrain K08M4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio syngnathi strain K08M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio syngnathi strain K08M4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

921938 bp

Thymine Count

918676 bp

Guanine Count

727743 bp

Cytosine Count

729971 bp

Genome Length

3298328 bp

Protein-coding Genes

2822 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylisocitrate lyaseK08M4_RS08025Not AvailableNegative1743087 - 174398332501.8
gntr family transcriptional regulatorK08M4_RS08030Not AvailableNegative1744080 - 174479927180.6
hd domain-containing phosphohydrolaseK08M4_RS08035Not AvailableNegative1745193 - 1748366119596.0
tripartite tricarboxylate transporter substrate binding proteinK08M4_RS08045Not AvailablePositive1748817 - 174978834899.6
tripartite tricarboxylate transporter tctb family proteinK08M4_RS08050Not AvailablePositive1750032 - 175053218500.4
tripartite tricarboxylate transporter permeaseK08M4_RS08055Not AvailablePositive1750543 - 175206353299.0
sulfite exporter taue/safe family proteinK08M4_RS08060Not AvailablePositive1752251 - 175300926601.0
hypothetical proteinK08M4_RS08065Not AvailablePositive1753236 - 17534277145.06
vf530 family dna-binding proteinK08M4_RS08070Not AvailableNegative1753580 - 175399316141.4
decarboxylating nadp(+)-dependent phosphogluconate dehydrogenaseK08M4_RS08075Not AvailableNegative1754410 - 175585852563.7

Displaying genes 1601 – 1610 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.