Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio syngnathi |
| Strain | strain K08M4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921938 bp
Thymine Count
918676 bp
Guanine Count
727743 bp
Cytosine Count
729971 bp
Genome Length
3298328 bp
Protein-coding Genes
2822 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | K08M4_RS00005 | Not Available | + | 100 - 1521 | 53697.1 |
| dna polymerase iii subunit beta | K08M4_RS00010 | Not Available | + | 1603 - 2703 | 40489.4 |
| dna replication/repair protein recf | K08M4_RS00015 | Not Available | + | 2757 - 3836 | 40755.6 |
| dna topoisomerase (atp-hydrolyzing) subunit b | K08M4_RS00020 | Not Available | + | 3854 - 6271 | 89545.4 |
| hsp20 family protein | K08M4_RS00025 | Not Available | + | 6775 - 7209 | 16488.6 |
| valine--pyruvate transaminase | K08M4_RS00030 | Not Available | - | 7463 - 8716 | 46620.7 |
| glycine--trna ligase subunit beta | K08M4_RS00035 | Not Available | - | 9123 - 11204 | 76394.6 |
| glycine--trna ligase subunit alpha | K08M4_RS00040 | Not Available | - | 11207 - 12136 | 35393.0 |
| tmem165/gdt1 family protein | K08M4_RS00045 | Not Available | + | 12557 - 13111 | 19731.7 |
| hypothetical protein | K08M4_RS00050 | Not Available | + | 13263 - 13517 | 9690.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
